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  5. Zm00001e010447_P001

Zm00001e010447_P001 (Zm00001e010447)


Aliases : Zm00001e010447

Description : pre-60S ribosomal subunit assembly factor (NSA1)


Gene families : OG0005136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010447_P001

Target Alias Description ECC score Gene Family Method Actions
Aop_g22268 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.40 No alias No description available 0.08 OrthoFinder output from all 47 species
Cre17.g718650 No alias No description available 0.06 OrthoFinder output from all 47 species
Dcu_g10774 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013111001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os07g32350.1 LOC_Os07g32350 pre-60S ribosomal subunit assembly factor (NSA1) 0.04 OrthoFinder output from all 47 species
Pp3c13_24500V3.1 Pp3c13_24500 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g10518 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.02 OrthoFinder output from all 47 species
Smo418494 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc08g008160.4.1 Solyc08g008160 pre-60S ribosomal subunit assembly factor (NSA1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!