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  5. Zm00001e010349_P002

Zm00001e010349_P002 (AGO1, Zm00001e010349)


Aliases : AGO1, Zm00001e010349

Description : Protein argonaute 18 OS=Oryza sativa subsp. japonica (sp|q69up6|ago18_orysj : 980.0)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010349_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00265690 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AT1G31280 AGO2 Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT2G27880 AGO5 Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.04 OrthoFinder output from all 47 species
AT5G21150 AGO9 Argonaute family protein 0.03 OrthoFinder output from all 47 species
Gb_20550 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007503 AGO1 not classified & original description: CDS=68-2746 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 614 690
IPR032474 Argonaute_N 221 348
IPR003100 PAZ_dom 421 546
IPR003165 Piwi 705 1009
IPR032472 ArgoL2 558 603
IPR014811 ArgoL1 363 414
No external refs found!