Zm00001e010240_P002 (Zm00001e010240)

Aliases : Zm00001e010240

Description : E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana (sp|q9lt17|bbr_arath : 180.0)

Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e010240_P002

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os09g36460.1	LOC_Os09g36460	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp4g17160.1	No alias	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Pir_g10605	No alias	RING-H2-class CTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Zm00001e034827_P002	Zm00001e034827	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
MF	GO:0120227	acyl-CoA binding	IEP	HCCA
MF	GO:1901567	fatty acid derivative binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	270	311

External Links

No external refs found!