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  5. Zm00001e010221_P001

Zm00001e010221_P001 (Zm00001e010221)


Aliases : Zm00001e010221

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010221_P001
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00204180 STO,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.05 OrthoFinder output from all 47 species
AT1G78600 LZF1, STH3, DBB3 light-regulated zinc finger protein 1 0.03 OrthoFinder output from all 47 species
AT2G21320 No alias B-box zinc finger family protein 0.05 OrthoFinder output from all 47 species
Aev_g49135 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62651.t1 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.06 OrthoFinder output from all 47 species
Azfi_s2299.g110340 LZF1, STH3, DBB3 BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.17G005800.1 STO, Ceric.17G005800 BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G017400.1 STO, Ceric.33G017400 BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.39G035500.1 Ceric.39G035500 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g07454 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01175 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04609 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26676 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018818001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Gb_35653 No alias B-box zinc finger protein 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Mp8g01190.1 STO transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Msp_g21663 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07843 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31497 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018285 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g41002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Solyc06g073180.3.1 STO, Solyc06g073180 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Solyc07g062160.3.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Spa_g09326 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56814 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 52 91
IPR000315 Znf_B-box 3 41
No external refs found!