Zm00001e009889_P001 (COPT5, Zm00001e009889)

Aliases : COPT5, Zm00001e009889

Description : copper cation channel (COPT). copper transporter (COPT)

Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009889_P001

Target	Alias	Description	ECC score	Gene Family Method
AT5G20650	COPT5	copper transporter 5	0.03	OrthoFinder output from all 47 species
Aspi01Gene30468.t1	COPT5, Aspi01Gene30468	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g56420.1	COPT1, LOC_Os01g56420	copper cation channel (COPT). copper transporter (COPT)	0.05	OrthoFinder output from all 47 species
LOC_Os05g35050.1	COPT1, LOC_Os05g35050	copper cation channel (COPT). copper transporter (COPT)	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005483	No alias	copper transporter *(COPT) & original description: CDS=1-423	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s1464.g028041	No alias	copper transporter *(COPT) & original description: CDS=1-423	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
BP	GO:0015858	nucleoside transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
BP	GO:1901642	nucleoside transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	4	132

External Links

No external refs found!

Zm00001e009889_P001 (COPT5, Zm00001e009889)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation