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  5. Zm00001e009766_P001

Zm00001e009766_P001 (Zm00001e009766)


Aliases : Zm00001e009766

Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009766_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00198340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G49200 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G49210 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G03550 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G18773 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G17245 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G24015 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g012488 RHA3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04762 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g06976 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09630 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12179 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g12633 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g02144 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g03725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g07288 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g23659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23371 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g26269 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12530.t1 Aspi01Gene12530 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20280.t1 Aspi01Gene20280 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010071 No alias not classified & original description: CDS=1-183 0.02 OrthoFinder output from all 47 species
Azfi_s0030.g024239 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g27531 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.03 OrthoFinder output from all 47 species
Ceric.02G105300.1 ATL8, Ceric.02G105300 not classified & original description: pacid=50585310... 0.02 OrthoFinder output from all 47 species
Ceric.04G045600.1 Ceric.04G045600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.12G015900.1 Ceric.12G015900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.18G057400.1 RHA3A, Ceric.18G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.21G071800.1 Ceric.21G071800 not classified & original description: pacid=50603516... 0.03 OrthoFinder output from all 47 species
Ceric.25G031000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.34G017800.1 Ceric.34G017800 not classified & original description: pacid=50623173... 0.02 OrthoFinder output from all 47 species
Ceric.34G056700.1 Ceric.34G056700 not classified & original description: pacid=50623881... 0.03 OrthoFinder output from all 47 species
Ceric.38G066400.1 Ceric.38G066400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.39G005300.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g14977 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g00774 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g03720 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g18286 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42850 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_23076 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_35557 ATL5 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_35824 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g53500.1 LOC_Os01g53500 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g46600.1 LOC_Os02g46600 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g54830.1 LOC_Os02g54830 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g16970.1 LOC_Os04g16970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39260.1 LOC_Os05g39260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g45060.1 LOC_Os05g45060 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g37760.1 ATL6, LOC_Os08g37760 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os10g39450.1 RHA3B, LOC_Os10g39450 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g57067 ATL4H not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39367 RHA3B not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_111727g0010 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_126287g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_17390g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_181940g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_229590g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_2679g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_391931g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_63503g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7553g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_85088g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_88044g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g16085 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g08032 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g24535 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g00818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g03615 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g27082 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g10849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021081 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g52337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006910.4.1 Solyc01g006910 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g061250.3.1 Solyc06g061250 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc09g089890.1.1 Solyc09g089890 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Tin_g26609 XERICO not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38882 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e000396_P001 Zm00001e000396 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e007157_P001 Zm00001e007157 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007957_P001 ATL6, Zm00001e007957 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015470_P001 ATL8, Zm00001e015470 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e015495_P001 Zm00001e015495 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e017510_P001 Zm00001e017510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019779_P001 Zm00001e019779 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e029032_P001 Zm00001e029032 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 167 210
No external refs found!