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Aliases : WIP6, DOT5, Zm00001e009663
Description : C2H2 zinc finger transcription factor
Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00243980 | WIP2, NTT,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.12 | OrthoFinder output from all 47 species | |
| AMTR_s00093p00164790 | WIP6, DOT5,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00114p00100630 | WIP3,... | Zinc finger protein WIP3 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AT1G13290 | WIP6, DOT5 | C2H2-like zinc finger protein | 0.1 | OrthoFinder output from all 47 species | |
| AT1G51220 | WIP5 | WIP domain protein 5 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G20880 | WIP4 | WIP domain protein 4 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26211 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g33925 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g29352 | WIP4 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene00798.t1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene00894.t1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012566 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06863 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06979 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16915 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38686 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23817 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009046001 | TT1, WIP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011943001 | WIP6, DOT5 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01025301001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032076001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.2 | OrthoFinder output from all 47 species | |
| GSVIVT01033329001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g39390.1 | WIP2, NTT, LOC_Os08g39390 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g13680.1 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g31140.1 | WIP2, NTT, LOC_Os09g31140 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Len_g09772 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3555g0010 | WIP6, DOT5 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| MA_795128g0010 | WIP2, NTT | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_97533g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g09500.1 | WIP2, NTT | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18497 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17084 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38869 | WIP3 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g58693 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12905 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11963 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g22187 | No alias | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009770.3.1 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g074360.4.1 | WIP3, Solyc06g074360 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12011 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14883 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g31555 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003504_P001 | WIP2, NTT, Zm00001e003504 | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e019211_P001 | WIP4, Zm00001e019211 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024373_P001 | WIP2, NTT, Zm00001e024373 | C2H2 zinc finger transcription factor | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e026959_P001 | WIP5, Zm00001e026959 | C2H2 zinc finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e031762_P001 | WIP4, Zm00001e031762 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034518_P001 | WIP2, NTT, Zm00001e034518 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |