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  5. Zm00001e009602_P001

Zm00001e009602_P001 (ATRABA2A, ATRAB11C,...)


Aliases : ATRABA2A, ATRAB11C, ATRAB-A2A, RAB-A2A, RAB11c, Zm00001e009602

Description : A-class RAB GTPase


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009602_P001
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00167390 ATRABA5C, ARA4,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
AT3G15060 AtRABA1g, RABA1g RAB GTPase homolog A1G 0.03 OrthoFinder output from all 47 species
AT4G18430 AtRABA1e, RABA1e RAB GTPase homolog A1E 0.03 OrthoFinder output from all 47 species
Aev_g17596 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04921 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01612 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G031600.1 ATRABA5C, ARA4,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g46356 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03232 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g05986 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430522g0010 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Sam_g40897 No alias A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04947 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 20 180
No external refs found!