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  5. Zm00001e009600_P001

Zm00001e009600_P001 (PHB2, ATPHB2, Zm00001e009600)


Aliases : PHB2, ATPHB2, Zm00001e009600

Description : Prohibitin-2, mitochondrial OS=Arabidopsis thaliana (sp|q9znt7|phb2_arath : 382.0)


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009600_P001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00071p00140730 PHB1, ATPHB1,... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G03860 PHB2, ATPHB2 prohibitin 2 0.05 OrthoFinder output from all 47 species
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.03 OrthoFinder output from all 47 species
Adi_g023316 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00373 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14780 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Dac_g03655 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15220 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15221 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21632 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24064 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os07g15880.1 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Len_g48441 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_9438062g0010 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp1g10410.1 PHB1, ATPHB1 Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g01082 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29084 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40562 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12045 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07645 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022270 PHB1, ATPHB1 not classified & original description: CDS=199-1050 0.02 OrthoFinder output from all 47 species
Sam_g17556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g008140.3.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g12157 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21133 PHB1, ATPHB1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g25323 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00443 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 39 214
No external refs found!