Zm00001e009387_P001 (Zm00001e009387)

Aliases : Zm00001e009387

Description : component mtRPL22 of large ribosomal subunit proteome

Gene families : OG0005689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005689_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009387_P001
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AT4G28360	No alias	Ribosomal protein L22p/L17e family protein	0.09	OrthoFinder output from all 47 species
Aop_g14639	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ceric.27G068600.1	Ceric.27G068600	component *(bL22m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Cre05.g242950	No alias	No description available	0.04	OrthoFinder output from all 47 species
Gb_36607	No alias	component mtRPL22 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
LOC_Os01g42980.1	LOC_Os01g42980	component mtRPL22 of large ribosomal subunit proteome	0.24	OrthoFinder output from all 47 species
Mp1g21100.1	No alias	component mtRPL22 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Pir_g64774	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g08750	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc04g017680.3.1	Solyc04g017680	component mtRPL22 of large ribosomal subunit proteome	0.17	OrthoFinder output from all 47 species
Spa_g10569	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Tin_g16483	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001063	Ribosomal_L22	160	229

External Links

No external refs found!

Zm00001e009387_P001 (Zm00001e009387)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation