Zm00001e009371_P002 (AL2, Zm00001e009371)

Aliases : AL2, Zm00001e009371

Description : Alfin-like transcription factor

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009371_P002

Target	Alias	Description	ECC score	Gene Family Method
AT3G42790	AL3	alfin-like 3	0.02	OrthoFinder output from all 47 species
Adi_g011436	AL7	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Adi_g050291	AL7	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Adi_g105203	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Aop_g49023	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene16232.t2	AL2, Aspi01Gene16232	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0075.g037610	AL7	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Cre07.g320950	AL2	RNA biosynthesis.transcriptional activation.Alfin-like...	0.02	OrthoFinder output from all 47 species
Len_g20172	AL2	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Solyc03g121930.3.1	AL5, Solyc03g121930	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Spa_g05937	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Zm00001e027040_P001	AL6, Zm00001e027040	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e028587_P002	AL4, Zm00001e028587	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021998	Alfin_N	59	184
IPR019787	Znf_PHD-finger	236	283

External Links

No external refs found!