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  5. Zm00001e009370_P001

Zm00001e009370_P001 (VPS2.1, Zm00001e009370)


Aliases : VPS2.1, Zm00001e009370

Description : component VPS2/CHMP2 of ESCRT-III complex


Gene families : OG0003671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009370_P001
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Adi_g129856 VPS2.1 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g06471 VPS2.1 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Als_g15324 VPS2.1 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Aop_g01099 VPS2.1 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G069800.1 VPS2.1, Ceric.35G069800 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Cre04.g213450 VPS2.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Dac_g05552 VPS2.1 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015115001 VPS2.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 OrthoFinder output from all 47 species
Gb_23887 VPS2.1 component VPS2/CHMP2 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Gb_31864 VPS2.1 component VPS2/CHMP2 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Mp8g06820.1 VPS2.1 component VPS2/CHMP2 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014497 VPS2.1 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e033163_P001 VPS2.1, Zm00001e033163 component VPS2/CHMP2 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 186
No external refs found!