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  5. Zm00001e009321_P001

Zm00001e009321_P001 (UPL1, Zm00001e009321)


Aliases : UPL1, Zm00001e009321

Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009321_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00211330 UPL1,... Protein degradation.peptide tagging.Ubiquitin... 0.11 OrthoFinder output from all 47 species
AMTR_s00061p00204480 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
AT1G55860 UPL1 ubiquitin-protein ligase 1 0.03 OrthoFinder output from all 47 species
AT1G70320 UPL2 ubiquitin-protein ligase 2 0.09 OrthoFinder output from all 47 species
Adi_g016298 UPL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067762 UPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077941 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087677 UPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107426 UPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04900 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.1 OrthoFinder output from all 47 species
Aev_g16628 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06583 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06863 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g14108 UPL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g16302 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g10928 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27017 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18034 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10347.t1 UPL1, Aspi01Gene10347 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0087.g042300 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=382-11403 0.09 OrthoFinder output from all 47 species
Azfi_s0116.g046399 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 0.05 OrthoFinder output from all 47 species
Cba_g29999 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36312 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G067500.1 UPL2, Ceric.10G067500 E3 ubiquitin ligase *(UPL1) & original description:... 0.1 OrthoFinder output from all 47 species
Ceric.29G011900.1 UPL1, Ceric.29G011900 E3 ubiquitin ligase *(UPL1) & original description:... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020556.65 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g02070 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g12771 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g04957 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21858 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05120 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10043 UPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21297 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009206001 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
GSVIVT01009208001 UPL2 E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014697001 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014698001 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_17424 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Gb_21632 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Gb_26784 UPL2 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26785 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
LOC_Os09g07900.1 UPL1, LOC_Os09g07900 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os12g24080.1 UPL2, LOC_Os12g24080 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Len_g22981 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23822 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05050 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_20049g0010 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
MA_20049g0020 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_7295g0020 UPL2 E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g21620.1 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Msp_g48585 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13587 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15570 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44293 UPL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57729 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02429 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003603 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=387-11411 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022779 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=249-11528 0.06 OrthoFinder output from all 47 species
Sam_g40563 No alias E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo154179 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
Solyc04g076620.4.1 UPL1, Solyc04g076620 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Solyc07g065630.4.1 UPL1, Solyc07g065630 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Spa_g23911 UPL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g28076 UPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29717 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33388 UPL2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g40173 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45124 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52454 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21189 UPL1 E3 ubiquiTin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025527 HUWE1/Rev1_UBM 2627 2654
IPR025527 HUWE1/Rev1_UBM 2701 2732
IPR025527 HUWE1/Rev1_UBM 2664 2695
IPR015940 UBA 1281 1317
IPR000569 HECT_dom 3404 3714
IPR010314 E3_Ub_ligase_DUF913 421 784
IPR010309 E3_Ub_ligase_DUF908 85 361
No external refs found!