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  5. Zm00001e008905_P001

Zm00001e008905_P001 (ERD2B, Zm00001e008905)


Aliases : ERD2B, Zm00001e008905

Description : ERD2 COPI trafficking K/HDEL-signature receptor


Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008905_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G25040 ERD2B endoplasmic reticulum retention defective 2B 0.06 OrthoFinder output from all 47 species
Adi_g110140 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Ala_g07087 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Ala_g38018 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Aop_g35378 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
Cba_g03077 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Ceric.08G005400.1 ERD2B, Ceric.08G005400 COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Dac_g40104 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.06 OrthoFinder output from all 47 species
Ehy_g03485 No alias COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
Ehy_g05451 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Ehy_g08916 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.05 OrthoFinder output from all 47 species
LOC_Os11g28340.1 ERD2B, LOC_Os11g28340 ERD2 COPI trafficking K/HDEL-signature receptor 0.03 OrthoFinder output from all 47 species
Msp_g02326 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.04 OrthoFinder output from all 47 species
Ore_g06999 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Ore_g07224 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Ppi_g05082 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Ppi_g18736 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004634 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
Smo75833 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Solyc09g091900.4.1 ERD2B, Solyc09g091900 ERD2 COPI trafficking K/HDEL-signature receptor 0.03 OrthoFinder output from all 47 species
Zm00001e032183_P001 ERD2, ATERD2,... ERD2 COPI trafficking K/HDEL-signature receptor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!