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  5. Zm00001e008822_P002

Zm00001e008822_P002 (Zm00001e008822)


Aliases : Zm00001e008822

Description : ubiquitin protein ligase (WAV3)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008822_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 OrthoFinder output from all 47 species
Als_g15196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56860.t1 Aspi01Gene56860 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.05 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.71 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.58 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g25091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_30682 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g40664.1 LOC_Os02g40664 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g01160.1 LOC_Os04g01160 ubiquitin protein ligase (WAV3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g05990.1 LOC_Os06g05990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g02184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29530 No alias E3 ubiquitin ligase *(WAV3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005076 No alias not classified & original description: CDS=439-2763 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007353 No alias not classified & original description: CDS=1-2007 0.02 OrthoFinder output from all 47 species
Sam_g52375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010994_P001 Zm00001e010994 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 132 161
IPR002035 VWF_A 316 434
No external refs found!