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  5. Zm00001e008701_P001

Zm00001e008701_P001 (Zm00001e008701)


Aliases : Zm00001e008701

Description : Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lvv5|tl15b_arath : 266.0)


Gene families : OG0005320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008701_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G52970 No alias thylakoid lumen 15.0 kDa protein 0.07 OrthoFinder output from all 47 species
Azfi_s0034.g025415 No alias not classified & original description: CDS=119-883 0.04 OrthoFinder output from all 47 species
Cba_g08322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G026500.1 Ceric.33G026500 not classified & original description: pacid=50607555... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021128.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre15.g636050 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01025731001 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.12 OrthoFinder output from all 47 species
Gb_41289 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g34950.1 LOC_Os07g34950 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.1 OrthoFinder output from all 47 species
Len_g19585 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10158783g0010 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_10434952g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp8g01080.1 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g24996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g084040.2.1 Solyc10g084040 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!