Zm00001e008672_P001 (EST3, MRP4, ATMRP4,...)

Aliases : EST3, MRP4, ATMRP4, ABCC4, Zm00001e008672

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e008672_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g117099	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g15313	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07445	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g16130	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g44914	AtABCC2, ABCC2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06591	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g26997	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g31869	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g38039	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000681.7	ABCC1, ATABCC1,...	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g04801	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g44984	MRP9, ABCC9, ATMRP9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g31381	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10826	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21779	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_14725	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Lfl_g08651	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g24440	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10434115g0010	EST3, MRP4, ATMRP4, ABCC4	ABC transporter C family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_8298525g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_837292g0010	ATABCC5, MRP5,...	ABC transporter C family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Msp_g14395	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g20671	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018945	AtABCC2, ABCC2,...	not classified & original description: CDS=17-331	0.02	OrthoFinder output from all 47 species
Sam_g08938	No alias	glutathione S-conjugate transporter & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g01934	ATABCC5, MRP5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g21584	ATABCC5, MRP5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g23801	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	690	823
IPR003439	ABC_transporter-like_ATP-bd	1311	1459
IPR011527	ABC1_TM_dom	334	599
IPR011527	ABC1_TM_dom	984	1220

External Links

No external refs found!

Zm00001e008672_P001 (EST3, MRP4, ATMRP4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation