LOC_Os03g31300 (Os03g0426900)


Aliases : Os03g0426900

Description : 20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)


Gene families : OG_01_0000281 (Gene family) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g31300
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.14 Gene family
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.1 Gene family
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.08 Gene family
Cpa|evm.model.tig00000655.28 No alias No description available 0.03 Gene family
Cpa|evm.model.tig00001416.4 No alias 20.2.1 stress.abiotic.heat Encodes a... 0.03 Gene family
Cpa|evm.model.tig00020996.22 No alias 20.2.1 stress.abiotic.heat Encodes a... 0.02 Gene family
Cpa|evm.model.tig00021365.4 No alias No description available 0.01 Gene family
Cre02.g090850 No alias 20.2.1 stress.abiotic.heat Encodes a... 0.03 Gene family
Cre11.g467644 No alias No description available 0.05 Gene family
GSVIVT01007880001 No alias No description available 0.1 Gene family
GSVIVT01011496001 No alias 20.2.1 stress.abiotic.heat Encodes a... 0.1 Gene family
GSVIVT01035900001 No alias No description available 0.08 Gene family
MA_21130g0010 No alias No description available 0.02 Gene family
Smo147913 PACid_15408578 No description available 0.02 Gene family
Smo170696 PACid_15407546 No description available 0.08 Gene family
Smo174539 PACid_15418459 No description available 0.08 Gene family
Smo411118 PACid_15406211 No description available 0.11 Gene family
Smo418380 PACid_15406020 No description available 0.02 Gene family
Solyc02g088610.3.1 Solyc02g088610.3 20.2.1 stress.abiotic.heat Encodes a... 0.09 Gene family
Solyc03g115230.3.1 Solyc03g115230.3 No description available 0.12 Gene family
Solyc06g011370.3.1 Solyc06g011370.3 No description available 0.07 Gene family
Solyc06g082560.2.1 Solyc06g082560.2 No description available 0.01 Gene family
Zm00001d003894 GRMZM2G001084 No description available 0.02 Gene family
Zm00001d015520 GRMZM2G060561 No description available 0.07 Gene family
Zm00001d025273 GRMZM2G123922 No description available 0.03 Gene family
Zm00001d029557 GRMZM2G130121 20.2.1 stress.abiotic.heat Encodes a... 0.17 Gene family
Zm00001d038806 GRMZM2G360681 No description available 0.2 Gene family
Zm00001d047302 GRMZM2G162968 20.2.1 stress.abiotic.heat Encodes a... 0.21 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004176 Clp_N 177 228
IPR004176 Clp_N 102 151
IPR003959 ATPase_AAA_core 286 418
IPR003959 ATPase_AAA_core 683 851
IPR019489 Clp_ATPase_C 858 937
No external refs found!