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  5. Zm00001e008436_P002

Zm00001e008436_P002 (Zm00001e008436)


Aliases : Zm00001e008436

Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008436_P002
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G13730 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.02 OrthoFinder output from all 47 species
Adi_g047948 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09159 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11149 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010768 No alias mRNA endoribonuclease *(G3BP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01714 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10558 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008107001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01027918001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g29480.1 LOC_Os02g29480 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g30550.1 LOC_Os03g30550 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g30430.1 LOC_Os04g30430 mRNA endoribonuclease (G3BP) 0.06 OrthoFinder output from all 47 species
LOC_Os04g43150.2 LOC_Os04g43150 mRNA endoribonuclease (G3BP) 0.06 OrthoFinder output from all 47 species
Lfl_g17329 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_15773g0010 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Pp3c26_10520V3.1 Pp3c26_10520 Nuclear transport factor 2 (NTF2) family protein with... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017466 No alias mRNA endoribonuclease *(G3BP) & original description:... 0.02 OrthoFinder output from all 47 species
Solyc06g083300.4.1 Solyc06g083300 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 321 379
IPR002075 NTF2_dom 23 139
No external refs found!