1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e008256_P006

Zm00001e008256_P006 (SAG15, CLPD, ERD1,...)


Aliases : SAG15, CLPD, ERD1, Zm00001e008256

Description : chaperone component ClpD of chloroplast Clp-type protease complex


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008256_P006

Target Alias Description ECC score Gene Family Method Actions
Aev_g05486 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Aop_g16852 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Azfi_s0343.g065746 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cba_g33300 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G005700.1 CLPB3, CLPB-P,... organellar chaperone *(Clp-p/Clp-m) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G073100.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001416.4 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021365.5 ATHSP101, HOT1, HSP101 Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre43.g760497 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01008635001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g21685 ATHSP101, HOT1, HSP101 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02316 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12931 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Msp_g23938 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Pir_g30928 HSP93-V, DCA1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g23962 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009060 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original... 0.03 OrthoFinder output from all 47 species
Sam_g17391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo147913 SAG15, CLPD, ERD1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Tin_g01255 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Tin_g10041 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 644 819
IPR041546 ClpA/ClpB_AAA_lid 439 541
IPR004176 Clp_R_dom 81 106
IPR004176 Clp_R_dom 158 207
IPR019489 Clp_ATPase_C 825 903
IPR003959 ATPase_AAA_core 296 413
No external refs found!