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  5. Zm00001e008229_P001

Zm00001e008229_P001 (HDA09, HDA9, Zm00001e008229)


Aliases : HDA09, HDA9, Zm00001e008229

Description : class-I histone deacetylase. component HDA9 of HDA9-PWR deacetylation complex


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008229_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00130970 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AT3G44490 hda17 histone deacetylase 17 0.02 OrthoFinder output from all 47 species
AT5G63110 HDA6, RTS1,... histone deacetylase 6 0.02 OrthoFinder output from all 47 species
Adi_g105321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01412 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Aop_g01789 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06846.t1 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025970 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Ceric.03G095800.1 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Ceric.25G049900.1 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.121 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001307.14 HDA09, HDA9 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase... 0.03 OrthoFinder output from all 47 species
Dac_g07623 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Dcu_g12683 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
GSVIVT01023839001 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
Gb_10850 HDA6, RTS1,... class-I histone deacetylase. deacetylase component HDA19... 0.03 OrthoFinder output from all 47 species
Lfl_g01503 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
MA_47814g0010 ATHDA19, HDA1,... class-I histone deacetylase 0.03 OrthoFinder output from all 47 species
Mp1g29190.1 ATHDA19, HDA1,... class-I histone deacetylase. deacetylase component HDA19... 0.04 OrthoFinder output from all 47 species
Ppi_g03843 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Sam_g17216 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Smo74186 ATHDA19, HDA1,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Solyc11g067020.3.1 HDA09, HDA9,... class-I histone deacetylase. component HDA9 of HDA9-PWR... 0.02 OrthoFinder output from all 47 species
Spa_g18068 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 24 314
No external refs found!