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  5. Zm00001e008174_P001

Zm00001e008174_P001 (Zm00001e008174)


Aliases : Zm00001e008174

Description : SMXL strigolactone signal transducer


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008174_P001
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.06 OrthoFinder output from all 47 species
AT3G52490 No alias Double Clp-N motif-containing P-loop nucleoside... 0.09 OrthoFinder output from all 47 species
Adi_g017569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043981 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g06176 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g17308 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21284 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034648001 No alias Phytohormones.strigolactone.perception and signal... 0.1 OrthoFinder output from all 47 species
Gb_32222 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_33499 No alias SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
LOC_Os02g33460.1 LOC_Os02g33460 SMXL strigolactone signal transducer 0.05 OrthoFinder output from all 47 species
LOC_Os04g33980.1 LOC_Os04g33980 SMXL strigolactone signal transducer 0.06 OrthoFinder output from all 47 species
LOC_Os08g15230.1 LOC_Os08g15230 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
LOC_Os11g05820.1 LOC_Os11g05820 SMXL strigolactone signal transducer 0.06 OrthoFinder output from all 47 species
MA_15290g0010 No alias Protein SUPPRESSOR OF MAX2 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_800170g0010 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Ore_g25590 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Ore_g38684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08821 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g23977 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020044 No alias strigolactone signal modulator *(SMXL) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g007260.3.1 Solyc01g007260 SMXL strigolactone signal transducer 0.04 OrthoFinder output from all 47 species
Solyc05g055200.4.1 Solyc05g055200 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Solyc07g006540.3.1 Solyc07g006540 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Solyc11g006650.3.1 Solyc11g006650 SMXL strigolactone signal transducer 0.08 OrthoFinder output from all 47 species
Zm00001e024175_P002 Zm00001e024175 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Zm00001e039910_P002 Zm00001e039910 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 86 120
No external refs found!