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  5. LOC_Os03g30460

LOC_Os03g30460 (Os03g0417900)


Aliases : Os03g0417900

Description : 31.4 cell.vesicle transport Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network. POKY POLLEN TUBE (POK)


Gene families : OG_01_0004546 (Gene family) Phylogenetic Tree(s): OG0004546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g30460
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G71270 POK, TTD8, ATVPS52 Vps52 / Sac2 family 0.07 Gene family
Cpa|evm.model.tig00001003.6 No alias 31.4 cell.vesicle transport Encodes a homolog of the... 0.02 Gene family
Cre08.g367200 No alias 33.99 development.unspecified Encodes a homolog of the... 0.05 Gene family
GSVIVT01012102001 No alias 33.99 development.unspecified Encodes a homolog of the... 0.07 Gene family
Smo235014 PACid_15402941 33.99 development.unspecified Encodes a homolog of the... 0.09 Gene family
Solyc02g094090.3.1 Solyc02g094090.3 33.99 development.unspecified Encodes a homolog of the... 0.07 Gene family
Zm00001d047283 GRMZM2G124239 31.4 cell.vesicle transport Encodes a homolog of the... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007258 Vps52 83 582
No external refs found!