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  5. Zm00001e007747_P003

Zm00001e007747_P003 (ATPUB45, PUB45, Zm00001e007747)


Aliases : ATPUB45, PUB45, Zm00001e007747

Description : U-box domain-containing protein 6 OS=Arabidopsis thaliana (sp|o48700|pub6_arath : 544.0)


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007747_P003
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00254320 ATPUB45, PUB45,... U-box domain-containing protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G24330 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g27084 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51166 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62287 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g43192 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g41250.1 ATPUB45, PUB45,... U-box domain-containing protein 7 OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Len_g33283 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04138 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11019 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08183 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02310 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g015070.4.1 Solyc05g015070 U-box domain-containing protein 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g10644 ATPUB45, PUB45 E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 281 350
No external refs found!