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Aliases : Zm00001e007570
Description : component Sm-D2 of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex
Gene families : OG0003421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003421_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00221440 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G47640 | No alias | Small nuclear ribonucleoprotein family protein | 0.08 | OrthoFinder output from all 47 species | |
| Als_g20203 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27074 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029762 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G039600.1 | Ceric.04G039600 | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021133.4 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
| Cre10.g453450 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01011627001 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028015001 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_19475 | No alias | component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g24970.1 | LOC_Os05g24970 | component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g33846 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g10740.1 | No alias | component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g40255 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c10_17640V3.1 | Pp3c10_17640 | Small nuclear ribonucleoprotein family protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_17690V3.1 | Pp3c12_17690 | Small nuclear ribonucleoprotein family protein | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0075.g017379 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08212 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g46531 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22292 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g15303 | No alias | component *(Sm-D2) of U1/U2/U4/U5-associated Sm... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 26 | 100 |
| No external refs found! |