Zm00001e007434_P001 (RMA3, ATRMA3, Zm00001e007434)


Aliases : RMA3, ATRMA3, Zm00001e007434

Description : RING-HC-class E3 ligase


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007434_P001
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
Adi_g072154 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107271 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0159.g053943 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Ceric.10G009900.1 Ceric.10G009900 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G056300.1 Ceric.30G056300 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g02891 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014361001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc06g051230.4.1 Solyc06g051230 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g03199 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05542 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29641 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017513_P001 Zm00001e017513 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 269 319
No external refs found!