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  5. Zm00001e007139_P001

Zm00001e007139_P001 (Zm00001e007139)


Aliases : Zm00001e007139

Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 486.0)


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007139_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G65920 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 OrthoFinder output from all 47 species
AT1G69710 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
AT3G47660 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 OrthoFinder output from all 47 species
Aev_g20707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023605 No alias not classified & original description: CDS=735-3878 0.03 OrthoFinder output from all 47 species
Cba_g15359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G007900.1 Ceric.33G007900 not classified & original description: pacid=50607060... 0.03 OrthoFinder output from all 47 species
Dcu_g07174 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013496001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Gb_27545 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os01g50470.1 LOC_Os01g50470 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45980.1 LOC_Os02g45980 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Lfl_g10316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430532g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
MA_54149g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017246 No alias not classified & original description: CDS=1-3951 0.03 OrthoFinder output from all 47 species
Sam_g30101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g065120.3.1 Solyc11g065120 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Tin_g18817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029685_P002 PRAF1, Zm00001e029685 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 639 700
IPR000408 Reg_chr_condens 582 631
IPR000408 Reg_chr_condens 416 465
IPR000408 Reg_chr_condens 481 527
IPR000408 Reg_chr_condens 312 360
IPR001849 PH_domain 15 123
IPR013591 Brevis_radix_dom 1003 1055
No external refs found!