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  5. Zm00001e006963_P001

Zm00001e006963_P001 (EMB2217, Zm00001e006963)


Aliases : EMB2217, Zm00001e006963

Description : Pentatricopeptide repeat-containing protein At1g79490, mitochondrial OS=Arabidopsis thaliana (sp|q9sak0|pp132_arath : 831.0)


Gene families : OG0008846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008846_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006963_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00136310 EMB2217,... Pentatricopeptide repeat-containing protein At1g79490,... 0.04 OrthoFinder output from all 47 species
AT1G79490 EMB2217 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g059054 EMB2217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05540 EMB2217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G034800.1 EMB2217, Ceric.18G034800 not classified & original description: pacid=50622124... 0.02 OrthoFinder output from all 47 species
Dac_g14182 EMB2217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04007 EMB2217 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02862 EMB2217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g52290.1 EMB2217, LOC_Os04g52290 Pentatricopeptide repeat-containing protein At1g79490,... 0.05 OrthoFinder output from all 47 species
Lfl_g17752 EMB2217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01044 EMB2217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02389 EMB2217 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10757 EMB2217 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033443 PPR_long 386 492
IPR002885 Pentatricopeptide_repeat 273 293
IPR002885 Pentatricopeptide_repeat 303 330
IPR002885 Pentatricopeptide_repeat 231 260
IPR002885 Pentatricopeptide_repeat 195 220
IPR002885 Pentatricopeptide_repeat 340 366
No external refs found!