Aliases : APO1, Zm00001e006942
Description : APO protein 1, chloroplastic OS=Arabidopsis thaliana (sp|q9xir4|apo1_arath : 481.0)
Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e006942_P002 | |
Cluster | HCCA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00019p00027190 | emb1629, APO2,... | APO protein 2, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Ala_g10415 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g15479 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g05432 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026139 | APO1 | organelle RNA splicing factor *(APO) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g03932 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g75124 | APO1 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08716 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g09606 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g41978 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g03861 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g26163 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01007874001 | APO3 | APO protein 3, mitochondrial OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018392001 | APO1 | APO protein 1, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01023615001 | emb1629, APO2 | APO protein 2, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g52520.4 | APO1, LOC_Os04g52520 | APO protein 1, chloroplastic OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Len_g20099 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g09642 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g01145 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g02046 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g00805 | APO1 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g17890 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0042.g012737 | APO1 | organelle RNA splicing factor *(APO) & original... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0079.g017818 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g17813 | No alias | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g17814 | No alias | organelle RNA splicing factor *(APO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo84056 | APO1 | APO protein 1, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g009400.4.1 | APO3, Solyc09g009400 | APO protein 3, mitochondrial OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g24352 | APO1 | organelle RNA splicing factor *(APO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g24427 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g18551 | emb1629, APO2 | organelle RNA splicing factor *(APO) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |