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  5. Zm00001e006764_P001

Zm00001e006764_P001 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE, Zm00001e006764

Description : Synaptotagmin-5 OS=Arabidopsis thaliana (sp|q8l706|syt5_arath : 763.0)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006764_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00267880 NTMC2TYPE4,... Synaptotagmin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00055p00090070 NTMC2T1.2, SYTB,... Synaptotagmin-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Azfi_s0199.g057481 SYT5, NTMC2T2.1,... not classified & original description: CDS=93-1391 0.03 OrthoFinder output from all 47 species
Cba_g16169 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Cba_g32210 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Cre01.g044600 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g044650 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g04826 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Ehy_g17237 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ppi_g28749 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo77428 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g014090.1.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 70 249
IPR000008 C2_dom 442 544
IPR000008 C2_dom 263 367
No external refs found!