Zm00001e006668_P001 (Zm00001e006668)


Aliases : Zm00001e006668

Description : UDP-L-arabinose mutase


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006668_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G02230 ATRGP1, RGP1 reversibly glycosylated polypeptide 1 0.04 OrthoFinder output from all 47 species
Aev_g40610 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06621 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12775 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38503 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06394 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02782 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01842 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G101600.1 ATRGP1, RGP1,... UDP-L-arabinose mutase & original description:... 0.05 OrthoFinder output from all 47 species
Cre13.g565800 ATRGP1, RGP1 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Dac_g04103 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07553 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008133001 RGP3, RGP Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
LOC_Os03g40270.1 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.06 OrthoFinder output from all 47 species
Lfl_g05869 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Mp2g10790.1 RGP3, RGP UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Mp2g10800.1 ATRGP1, RGP1 UDP-L-arabinose mutase 0.07 OrthoFinder output from all 47 species
Ppi_g15549 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012500 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=168-1190 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013218 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=186-1241 0.04 OrthoFinder output from all 47 species
Solyc02g089170.4.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Solyc03g070390.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Solyc04g005340.2.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 5 344
No external refs found!