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  5. Zm00001e006453_P001

Zm00001e006453_P001 (Zm00001e006453)


Aliases : Zm00001e006453

Description : Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana (sp|q9flx6|pp430_arath : 435.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006453_P001

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.04 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.04 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.07 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.02 OrthoFinder output from all 47 species
LOC_Os09g15800.1 LOC_Os09g15800 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 501 525
IPR002885 Pentatricopeptide_repeat 120 145
IPR002885 Pentatricopeptide_repeat 428 453
IPR002885 Pentatricopeptide_repeat 221 267
IPR002885 Pentatricopeptide_repeat 526 574
IPR002885 Pentatricopeptide_repeat 322 369
No external refs found!