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  5. Zm00001e006224_P001

Zm00001e006224_P001 (GIL1, Zm00001e006224)


Aliases : GIL1, Zm00001e006224

Description : regulator (GIL1) of phytochrome-mediated agravitropism


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006224_P001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT2G30380 No alias Plant protein of unknown function (DUF641) 0.03 OrthoFinder output from all 47 species
AT3G60680 No alias Plant protein of unknown function (DUF641) 0.03 OrthoFinder output from all 47 species
Ala_g04024 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00923.t1 Aspi01Gene00923 regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Cba_g43171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G039100.1 Ceric.23G039100 not classified & original description: pacid=50610817... 0.03 OrthoFinder output from all 47 species
Dac_g04718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_22635 No alias regulator (GIL1) of phytochrome-mediated agravitropism 0.02 OrthoFinder output from all 47 species
LOC_Os01g10680.1 LOC_Os01g10680 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g61040.1 GIL1, LOC_Os03g61040 regulator (GIL1) of phytochrome-mediated agravitropism 0.09 OrthoFinder output from all 47 species
LOC_Os05g11650.1 LOC_Os05g11650 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g25977 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Msp_g21170 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Nbi_g14729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26299 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007179 No alias not classified & original description: CDS=435-2498 0.03 OrthoFinder output from all 47 species
Solyc02g083110.1.1 GIL1, Solyc02g083110 regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
Solyc07g062310.4.1 Solyc07g062310 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g05907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012578_P001 Zm00001e012578 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e031256_P001 Zm00001e031256 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006943 DUF641_pln 97 214
No external refs found!