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  5. Zm00001e005964_P003

Zm00001e005964_P003 (GDH1, Zm00001e005964)


Aliases : GDH1, Zm00001e005964

Description : glutamate dehydrogenase


Gene families : OG0000985 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000985_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005964_P003
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00059320 GDH1,... Nutrient uptake.nitrogen assimilation.glutamate... 0.03 OrthoFinder output from all 47 species
AT5G07440 GDH2 glutamate dehydrogenase 2 0.07 OrthoFinder output from all 47 species
Als_g03635 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.02 OrthoFinder output from all 47 species
Als_g44144 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.02 OrthoFinder output from all 47 species
Cba_g32238 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.02 OrthoFinder output from all 47 species
Ceric.10G004000.1 GDH1, Ceric.10G004000 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01003691001 GDH2 Nutrient uptake.nitrogen assimilation.glutamate... 0.04 OrthoFinder output from all 47 species
GSVIVT01004636001 No alias Nutrient uptake.nitrogen assimilation.glutamate... 0.02 OrthoFinder output from all 47 species
GSVIVT01033402001 GDH1 Nutrient uptake.nitrogen assimilation.glutamate... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58040.1 GDH1, LOC_Os03g58040 glutamate dehydrogenase 0.04 OrthoFinder output from all 47 species
Ore_g03137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017023 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025893 GDH1 EC_1.4 oxidoreductase acting on CH-NH2 group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006096 Glu/Leu/Phe/Val/Trp_DH_C 176 408
IPR006097 Glu/Leu/Phe/Val/Trp_DH_dimer 33 159
No external refs found!