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  5. Zm00001e005947_P001

Zm00001e005947_P001 (EMB251, RFC3, EMB161,...)


Aliases : EMB251, RFC3, EMB161, EMB2775, Zm00001e005947

Description : component RFC3 of PCNA sliding clamp loader complex


Gene families : OG0003475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005947_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00097520 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
AT5G27740 EMB251, RFC3,... ATPase family associated with various cellular activities (AAA) 0.02 OrthoFinder output from all 47 species
Aop_g01202 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0440.g070308 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.48 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.03 OrthoFinder output from all 47 species
Cre16.g679950 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g27095 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
Gb_39448 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.02 OrthoFinder output from all 47 species
LOC_Os03g57870.1 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.03 OrthoFinder output from all 47 species
MA_10426511g0010 EMB251, RFC3,... Replication factor C subunit 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_168293g0010 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.05 OrthoFinder output from all 47 species
Ore_g03221 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
Solyc01g020440.3.1 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.07 OrthoFinder output from all 47 species
Spa_g00954 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Tin_g00584 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!