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  5. Zm00001e005507_P001

Zm00001e005507_P001 (BW52, ATMYB52, MYB52,...)


Aliases : BW52, ATMYB52, MYB52, Zm00001e005507

Description : transcription factor (MYB)


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005507_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00208260 MYB3R-3,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00186p00015620 BW52, ATMYB52,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.04 OrthoFinder output from all 47 species
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 OrthoFinder output from all 47 species
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.04 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 OrthoFinder output from all 47 species
Adi_g059961 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Adi_g074060 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Adi_g109382 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aev_g16421 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12163 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g14702 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15721 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g23951 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aob_g23891 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08938 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aop_g12966 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69303.t1 MYB54, ATMYB54,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000218 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Azfi_s0103.g044681 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.13G051800.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G036500.1 MYB56, AtMYB56,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cre07.g345350 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dac_g16265 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dde_g02295 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dde_g28841 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008484001 MYB54, ATMYB54 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01010006001 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01019967001 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01026481001 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51110.1 BW52, ATMYB52,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
LOC_Os06g43090.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g16435 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09604 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18053 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426628g0010 AtMYB3R4, MYB3R-4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g17210.1 ATMYB119, MYB119 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp3g09350.1 AtMYB98, MYB98 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp8g11870.1 AtMYB117, LOF1, MYB117 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Nbi_g12490 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g30617 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g45312 ATMYB3R5, MYB3R-5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50854 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_19960V3.1 Pp3c17_19960 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g12915 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45920 AtMYB124, MYB124, FLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo6091 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc03g098270.1.1 LOF2, MYB105,... no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc04g005710.3.1 AtMYB124,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Solyc06g076840.3.1 ATMYB119,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g12777 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Spa_g16126 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g23248 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Zm00001e018391_P001 MYB54, ATMYB54,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 56 99
IPR001005 SANT/Myb 4 49
No external refs found!