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Aliases : TCP12, BRC2, Zm00001e005407
Description : transcription factor (TCP)
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00158020 | TCP4, MEE35,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G60970 | TCP5 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07892 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30836 | TCP10 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01800 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18510 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g28173 | TCP2 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene02917.t2 | TCP3, Aspi01Gene02917 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene27741.t1 | TCP2, Aspi01Gene27741 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene64947.t1 | TCP3, Aspi01Gene64947 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054602 | TCP3 | TCP-type transcription factor & original description: CDS=18-1559 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g37204 | TCP2 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G069500.1 | TCP2, Ceric.37G069500 | TCP-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g18891 | TCP2 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008109001 | TCP5 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008234001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021528001 | ATTCP24, TCP24 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036449001 | TCP1 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07891 | ATTCP24, TCP24 | transcription factor (TCP) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_18221 | TCP4, MEE35 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30049 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35810 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38379 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g55750.1 | TCP5, LOC_Os01g55750 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g49880.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os05g43760.1 | TCP5, LOC_Os05g43760 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g33530.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g24480.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07001 | TCP10 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_12784g0010 | ATTCP24, TCP24 | transcription factor (TCP) | 0.07 | OrthoFinder output from all 47 species | |
| MA_4774g0010 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_75780g0010 | TCP2 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g04093 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26630 | TCP2 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo89227 | TCP2 | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g077250.2.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g069240.2.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g053410.4.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g008780.1.1 | TCP10, Solyc10g008780 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g11170 | TCP2 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g55051 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03446 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009811_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e011911_P001 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032821_P001 | TCP2, Zm00001e032821 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 113 | 266 |
| No external refs found! |