LOC_Os03g25990 (Os03g0377100)


Aliases : Os03g0377100

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A15 (EXPA15)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g25990
Cluster HCCA cluster: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Gene family
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Gene family
AT5G05290 EXPA2, ATHEXP... expansin A2 0.02 Gene family
GSVIVT01028215001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
LOC_Os01g14650 Os01g0248900 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16730 Os02g0267200 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os02g16800 Os02g0267900 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os05g19570 Os05g0276500 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os10g30330 Os10g0439100 10.7 cell wall.modification member of Alpha-Expansin... 0.06 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.05 Gene family
MA_10299189g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.06 Gene family
MA_10377235g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
MA_10433559g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.08 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_36587g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_37884g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_4979g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_86877g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Smo78615 PACid_15422897 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Solyc03g115890.3.1 Solyc03g115890.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc04g081870.3.1 Solyc04g081870.3 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Solyc06g005560.3.1 Solyc06g005560.3 10.7 cell wall.modification putative expansin. Naming... 0.06 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
Solyc09g010860.3.1 Solyc09g010860.3 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc09g018020.3.1 Solyc09g018020.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
Zm00001d025018 GRMZM2G074585 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032876 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.06 Gene family
Zm00001d038476 GRMZM2G361064 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d040249 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d048418 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 65 158
IPR007117 Expansin_CBD 169 249
No external refs found!