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  5. Zm00001e005317_P002

Zm00001e005317_P002 (Zm00001e005317)


Aliases : Zm00001e005317

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 107.0)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005317_P002
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G46110 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 OrthoFinder output from all 47 species
Adi_g106265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19661.t1 Aspi01Gene19661 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25837.t1 Aspi01Gene25837 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34495.t1 Aspi01Gene34495 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53794.t1 Aspi01Gene53794 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G030000.1 Ceric.03G030000 not classified & original description: pacid=50571333... 0.03 OrthoFinder output from all 47 species
Ehy_g16018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g10715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_3651g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g18480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010278 No alias not classified & original description: CDS=116-3175 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017637 No alias not classified & original description: CDS=64-3537 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025363 No alias not classified & original description: CDS=123-2075 0.02 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g010330.3.1 Solyc04g010330 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g030470.4.1 Solyc06g030470 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012257_P001 Zm00001e012257 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027133_P001 Zm00001e027133 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 21 439
No external refs found!