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  5. Zm00001e005271_P001

Zm00001e005271_P001 (AGO1, Zm00001e005271)


Aliases : AGO1, Zm00001e005271

Description : Protein argonaute 12 OS=Oryza sativa subsp. japonica (sp|q7y001|ago12_orysj : 1256.0)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005271_P001

Target Alias Description ECC score Gene Family Method Actions
Cre04.g214250 AGO1 Protein argonaute 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os04g52540.1 AGO2, LOC_Os04g52540 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 OrthoFinder output from all 47 species
Ore_g20845 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 862 1179
IPR003100 PAZ_dom 573 696
IPR032474 Argonaute_N 375 506
IPR014811 ArgoL1 516 567
IPR032472 ArgoL2 718 753
IPR032473 Argonaute_Mid_dom 764 840
No external refs found!