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Aliases : Zm00001e005260
Description : RNA chaperone (RZ1|GR-RBP)
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e005260_P002 | |
| Cluster | HCCA: Cluster_170 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00251200 | evm_27.TU.AmTr_v1... | Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00132070 | ATRZ-1A,... | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00024620 | GR-RBP3,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G26420 | ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g021389 | GR-RBP3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034694 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g052031 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g12373 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07993 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32091 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g61147 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01126 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01139 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21798 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29184 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18654.t1 | GR-RBP3, Aspi01Gene18654 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009723 | No alias | RNA chaperone *(RZ1) & original description: CDS=187-939 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009790 | CCR2, ATGRP7,... | not classified & original description: CDS=136-657 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011258 | CCR2, ATGRP7,... | not classified & original description: CDS=99-740 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031234 | No alias | not classified & original description: CDS=60-764 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0116.g046316 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: CDS=161-592 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0328.g065292 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: CDS=40-945 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06390 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10906 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g14006 | ATRZ-1A | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20547 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27479 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31532 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g38953 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g44420 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g55211 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G002500.1 | Ceric.09G002500 | RNA chaperone *(RZ1) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.09G066000.1 | Ceric.09G066000 | RNA chaperone *(RZ1) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G018200.1 | Ceric.12G018200 | RNA chaperone *(RZ1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Cre09.g392350 | GRP2, ATGRP2, GR-RBP2 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g02153 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03970 | GR-RBP5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g24341 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g00165 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03383 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04407 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06304 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06480 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37623 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45667 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g48605 | No alias | RNA chaperone *(RZ1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21776 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g52563 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14516 | GR-RBP4, GRP4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g16014 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001672001 | ATRZ-1A | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007865001 | GR-RBP3 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_03401 | ATRZ-1A | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40269 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g47800.1 | ATRZ-1A, LOC_Os03g47800 | RNA chaperone (RZ1|GR-RBP) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g08960.1 | LOC_Os07g08960 | RNA chaperone (RZ1|GR-RBP) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g31800.1 | GR-RBP3, LOC_Os12g31800 | RNA editing factor (ORRM) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03058 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21305 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30141 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g00362 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18518 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g32878 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428777g0010 | CCR2, ATGRP7,... | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10436424g0010 | ATRZ-1A | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_58957g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46058 | CCR2, ATGRP7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g23738 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g24962 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g26637 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05645 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33177 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g09294 | GR-RBP5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17461 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19209 | CCR1, GR-RBP8,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g33631 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g43693 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20372 | GR-RBP3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26805 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g32515 | GR-RBP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05591 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06306 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g24558 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30959 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31703 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0112.g020723 | No alias | not classified & original description: CDS=1-762 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33002 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g104840.4.1 | ATRZ-1A, Solyc01g104840 | RNA chaperone (RZ1|GR-RBP) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g071560.4.1 | Solyc03g071560 | RNA chaperone (RZ1|GR-RBP) | 0.12 | OrthoFinder output from all 47 species | |
| Solyc10g047130.2.1 | ATRZ-1A, Solyc10g047130 | RNA chaperone (RZ1|GR-RBP) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc10g081180.2.1 | GR-RBP3, Solyc10g081180 | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g008210.3.1 | Solyc11g008210 | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10878 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16011 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22222 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g30378 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g22300 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011440_P001 | Zm00001e011440 | RNA chaperone (RZ1|GR-RBP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e028502_P003 | Zm00001e028502 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |