Zm00001e005168_P001 (RXW8, Zm00001e005168)


Aliases : RXW8, Zm00001e005168

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005168_P001
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
AT4G02900 No alias ERD (early-responsive to dehydration stress) family protein 0.01 OrthoFinder output from all 47 species
Adi_g103215 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g01351 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27537 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26256 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g51620.1 RXW8, LOC_Os03g51620 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_10186845g0010 No alias CSC1-like protein At3g21620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g13770 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g048110.4.1 Solyc07g048110 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 356 621
IPR032880 Csc1/OSCA1-like_N 6 163
IPR027815 CSC1/OSCA1-like_cyt 186 344
No external refs found!