1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e005086_P004

Zm00001e005086_P004 (Zm00001e005086)


Aliases : Zm00001e005086

Description : ubiquitin receptor regulatory protein (DA1)


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005086_P004

Target Alias Description ECC score Gene Family Method Actions
Adi_g008069 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g083265 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105104 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10536 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13429 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05000 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g16090.1 DAR2, LOC_Os03g16090 ubiquitin receptor regulatory protein (DA1) 0.06 OrthoFinder output from all 47 species
LOC_Os03g42820.2 LOC_Os03g42820 ubiquitin receptor regulatory protein (DA1) 0.02 OrthoFinder output from all 47 species
LOC_Os12g40490.1 LOC_Os12g40490 ubiquitin receptor regulatory protein (DA1) 0.05 OrthoFinder output from all 47 species
Len_g01831 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04685 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02268 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63378 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16130 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23361 No alias ubiquiTin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022087 DA1-like_dom 345 554
IPR001781 Znf_LIM 196 251
No external refs found!