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  5. Zm00001e004653_P001

Zm00001e004653_P001 (Zm00001e004653)


Aliases : Zm00001e004653

Description : centromeric cohesion protection factor (SGO)


Gene families : OG0005368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004653_P001

Target Alias Description ECC score Gene Family Method Actions
Ala_g08452 No alias centromeric cohesion protection factor *(SGO) & original... 0.02 OrthoFinder output from all 47 species
Als_g01780 No alias centromeric cohesion protection factor *(SGO) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene10753.t1 Aspi01Gene10753 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G068500.1 Ceric.10G068500 centromeric cohesion protection factor *(SGO) & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01031478001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.1 OrthoFinder output from all 47 species
LOC_Os02g55570.1 LOC_Os02g55570 centromeric cohesion protection factor (SGO) 0.05 OrthoFinder output from all 47 species
LOC_Os10g31930.1 LOC_Os10g31930 centromeric cohesion protection factor (SGO) 0.18 OrthoFinder output from all 47 species
Len_g22012 No alias centromeric cohesion protection factor *(SGO) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g15940 No alias centromeric cohesion protection factor *(SGO) & original... 0.02 OrthoFinder output from all 47 species
MA_913563g0010 No alias centromeric cohesion protection factor (SGO) 0.07 OrthoFinder output from all 47 species
MA_958963g0010 No alias centromeric cohesion protection factor (SGO) 0.04 OrthoFinder output from all 47 species
Mp4g05800.1 No alias centromeric cohesion protection factor (SGO) 0.06 OrthoFinder output from all 47 species
Msp_g12980 No alias centromeric cohesion protection factor *(SGO) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00660 No alias centromeric cohesion protection factor *(SGO) & original... 0.08 OrthoFinder output from all 47 species
Ppi_g03664 No alias centromeric cohesion protection factor *(SGO) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015534 No alias centromeric cohesion protection factor *(SGO) & original... 0.04 OrthoFinder output from all 47 species
Sam_g15600 No alias centromeric cohesion protection factor *(SGO) & original... 0.06 OrthoFinder output from all 47 species
Solyc11g066350.2.1 Solyc11g066350 centromeric cohesion protection factor (SGO) 0.18 OrthoFinder output from all 47 species
Spa_g09690 No alias centromeric cohesion protection factor *(SGO) & original... 0.02 OrthoFinder output from all 47 species
Tin_g02539 No alias centromeric cohesion protection factor *(SGO) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0045132 meiotic chromosome segregation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR011515 Shugoshin_C 379 404
No external refs found!