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  5. Zm00001e004586_P001

Zm00001e004586_P001 (VPS2.3, Zm00001e004586)


Aliases : VPS2.3, Zm00001e004586

Description : component VPS2/CHMP2 of ESCRT-III complex


Gene families : OG0003140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004586_P001

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.6 VPS2.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Cre17.g735400 VPS2.3 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
LOC_Os10g33660.1 VPS2.3, LOC_Os10g33660 component VPS2/CHMP2 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 185
No external refs found!