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  5. Mp4g02570.1

Mp4g02570.1


Description : scaffolding component Sec13 of coat protein complex


Gene families : OG_01_0002497 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002497_tree ,
OG_02_0002542 (LandPlants) Phylogenetic Tree(s): OG_02_0002542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g02570.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cre17.g715750 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
LOC_Os03g61630.2 No alias scaffolding component Sec13 of coat protein complex 0.02 Archaeplastida
Pp3c22_20020V3.1 No alias transducin family protein / WD-40 repeat family protein 0.02 Archaeplastida
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.04 Archaeplastida
Zm00001e009580_P001 No alias scaffolding component Sec13 of coat protein complex 0.03 Archaeplastida
Zm00001e033208_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
AT2G30050 No alias transducin family protein / WD-40 repeat family protein 0.02 LandPlants
LOC_Os03g61630.2 No alias scaffolding component Sec13 of coat protein complex 0.02 LandPlants
MA_47428g0010 No alias Protein transport protein SEC13 homolog B OS=Arabidopsis... 0.02 LandPlants
Pp3c22_20020V3.1 No alias transducin family protein / WD-40 repeat family protein 0.02 LandPlants
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.04 LandPlants
Zm00001e009580_P001 No alias scaffolding component Sec13 of coat protein complex 0.03 LandPlants
Zm00001e016458_P001 No alias scaffolding component Sec13 of coat protein complex 0.02 LandPlants
Zm00001e033208_P004 No alias no hits & (original description: none) 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 206 245
IPR001680 WD40_repeat 12 42
IPR001680 WD40_repeat 152 196
IPR001680 WD40_repeat 55 91
IPR001680 WD40_repeat 102 137
No external refs found!