AMTR_s00056p00215280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.207

Description : RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum


Gene families : OG_01_0002128 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002128_tree ,
OG_02_0001404 (LandPlants) Phylogenetic Tree(s): OG_02_0001404_tree ,
OG_03_0002073 (SeedPlants) Phylogenetic Tree(s): OG_03_0002073_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00215280
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002125001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10428060g0020 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 Archaeplastida
MA_141447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
GSVIVT01002125001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 LandPlants
LOC_Os05g51180.1 No alias no hits & (original description: none) 0.02 LandPlants
MA_10428060g0020 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 LandPlants
MA_141447g0010 No alias no hits & (original description: none) 0.02 LandPlants
GSVIVT01002125001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 SeedPlants
MA_10428060g0020 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 SeedPlants
MA_141447g0010 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019084 Stm1-like_N 5 80
IPR006861 HABP4_PAIRBP1-bd 169 280
No external refs found!