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  5. Zm00001e004300_P003

Zm00001e004300_P003 (Zm00001e004300)


Aliases : Zm00001e004300

Description : G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004300_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00095620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Adi_g070212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24369.t1 Aspi01Gene24369 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene55088.t1 Aspi01Gene55088 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G068700.1 Ceric.10G068700 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g02950 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06116 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g36463 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g38693 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Gb_25991 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os08g25799.1 LOC_Os08g25799 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g25933 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09762 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g19106 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23688 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13769 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g04532 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g14687 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22386 UNE16 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 142 187
IPR001005 SANT/Myb 50 100
No external refs found!