Zm00001e003892_P002 (Zm00001e003892)


Aliases : Zm00001e003892

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 119.0)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003892_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G28150 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
Adi_g041418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18845.t1 Aspi01Gene18845 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25837.t1 Aspi01Gene25837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.02 OrthoFinder output from all 47 species
Cba_g17004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.03 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.06 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005997001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01006373001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_10435302g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010278 No alias not classified & original description: CDS=116-3175 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017637 No alias not classified & original description: CDS=64-3537 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026164 No alias not classified & original description: CDS=287-2665 0.02 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g081630.4.1 Solyc01g081630 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g10667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 56 491
No external refs found!