Zm00001e003855_P002 (SET22, SDG22, SUVH9,...)


Aliases : SET22, SDG22, SUVH9, Zm00001e003855

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. SUVH2/9 methyl-DNA-binding factor of DNA methylation pathway


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003855_P002

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene38256.t1 SUVH1, Aspi01Gene38256 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g05945 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.02G055100.1 SUVH1, Ceric.02G055100 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.13G009600.1 SUVH3, SDG19,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.32G043200.1 SUVH1, Ceric.32G043200 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dac_g22044 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dcu_g04024 SUVH5, SGD9 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g10200 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Gb_09748 SUVH1 class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
LOC_Os07g25450.1 ATSUVH2, SDG3,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Lfl_g02390 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pp3c4_9720V3.1 SDG33, SUVH4,... SU(VAR)3-9 homolog 4 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013538 SUVH5, SGD9 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Solyc03g093700.3.1 SDG23, SUVH6,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Solyc12g096990.2.1 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Zm00001e007370_P001 SUVH5, SGD9,... class V/Su(var) histone methyltransferase component of... 0.05 OrthoFinder output from all 47 species
Zm00001e033383_P001 ATSUVH2, SDG3,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Zm00001e033937_P001 Zm00001e033937 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003105 SRA_YDG 209 362
IPR001214 SET_dom 511 644
IPR007728 Pre-SET_dom 395 492
No external refs found!